Difference between revisions of "PMID:14153532"
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+ | {{RightTOC}} | ||
+ | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.4015.C517068573db9b--> | ||
+ | <!-- | ||
+ | ****************************************************************************************** | ||
+ | * | ||
+ | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
+ | * | ||
+ | ****************************************************************************************** --> | ||
+ | {| id="C517068573db9b" class=" tableEdit PMID_info_table" | ||
+ | |||
+ | |- | ||
+ | !align=left |Citation | ||
+ | || | ||
+ | '''WITKIN, EM and SICURELLA, NA''' (1964) PURE CLONES OF LACTOSE-NEGATIVE MUTANTS OBTAINED IN ESCHERICHIA COLI AFTER TREATMENT WITH 5-BROMOURACIL. ''J. Mol. Biol.'' '''8''':610-3 | ||
+ | |- | ||
+ | !align=left |Abstract | ||
+ | || | ||
+ | No abstract in PubMed | ||
+ | |- | ||
+ | !align=left |Links | ||
+ | || | ||
+ | [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=14153532 PubMed] | ||
+ | |||
+ | |- | ||
+ | !align=left |Keywords | ||
+ | || | ||
+ | |||
+ | |||
+ | |- class="tableEdit_footer" | ||
+ | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.4015.C517068573db9b&page=4015&pagename={{FULLPAGENAMEE}}&type=1&template=PMID_info_table edit table]</span> || | ||
+ | |} | ||
+ | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.4015.C517068573db9b--> | ||
+ | |||
+ | ==Main Points of the Paper == | ||
+ | {{LitSignificance}} | ||
+ | |||
+ | *Describes the introduction of mutations (by incorporation of 5BU into DNA) that results in cells unable to ferment lactose | ||
+ | *Sectoring phenotypes appear, indicative of the timing the mutation gets incorporated within a cell of a colony | ||
+ | |||
+ | == Materials and Methods Used == | ||
+ | {{LitMaterials}} | ||
+ | |||
+ | *Parent strain: Z-15 (radiation-resistant, serine-requiring variant of the thymineless strain B3) | ||
+ | |||
+ | *[[:Category:5-Bromouracil Mutagenesis|5-Bromouracil Mutagenesis]] (on plates) | ||
+ | **strain plated on 5BU completed 1 round of replication, whereby most of the thymine was replaced by 5BU | ||
+ | **strain plated on thymine (control) completed a normal round of DNA replication | ||
+ | *Bacto-eosin-methylene blue (EMB) indicator agar (for more information, click [http://en.wikipedia.org/wiki/Eosin_methylene_blue here]) | ||
+ | **dark red colonies (lactose +) | ||
+ | **colorless colonies (lactose -) | ||
+ | **mixed | ||
+ | ***large sectors (lac- component originated at the center and constituted one-eighth or more the area of the colony) | ||
+ | ***peripheral sectors | ||
+ | |||
+ | ==Phenotype Annotations== | ||
+ | {{AnnotationTableHelp}} | ||
+ | <protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.4015.N517068576895e--> | ||
+ | <!-- | ||
+ | ****************************************************************************************** | ||
+ | * | ||
+ | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
+ | * | ||
+ | ****************************************************************************************** --> | ||
+ | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="N517068576895e" class=" tableEdit Phenotype_Table_2" | ||
+ | |- | ||
+ | !|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status | ||
+ | |- | ||
+ | | | ||
+ | a mutation or genetic difference within a strain | ||
+ | | | ||
+ | *Taxon: Escherichia coli | ||
+ | *Strain: K-12 | ||
+ | *Substrain: z-15 | ||
+ | *NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=83333&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 83333] | ||
+ | | | ||
+ | *Genotype of Reference Strain: Strain z-15 | ||
+ | *Genotype of Experimental Strain : Derivatives of Z-15 | ||
+ | | | ||
+ | *Reference Condition: | ||
+ | | | ||
+ | OMP:0000284 | ||
+ | | | ||
+ | loss of utilization of carbon-containing compound | ||
+ | | | ||
+ | ECO:0000178 | ||
+ | | | ||
+ | in vivo assay evidence | ||
+ | | | ||
+ | Abolished utilization of carbon source lactose in mutant strain. See Table 1. | ||
+ | | | ||
+ | |||
+ | |||
+ | |- class="tableEdit_footer" | ||
+ | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.4015.N517068576895e&page=4015&pagename={{FULLPAGENAMEE}}&type=0&template=Phenotype_Table_2 edit table]</span> || || || || || || || || || | ||
+ | |} | ||
+ | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.4015.N517068576895e--></protect> | ||
+ | |||
+ | ==Notes== | ||
+ | |||
+ | OMP: After carbon utilization terms get finialized, make sure OMP ID matches what is on here since it might change. | ||
+ | |||
+ | ECO: Terms for assays are awaiting implementation of solid and liquid child terms to each one. Experiment used EMB | ||
+ | |||
+ | ==References== | ||
+ | {{RefHelp}} | ||
+ | <references/> | ||
+ | |||
+ | |||
+ | [[Category:Publication]] | ||
+ | [[Category:5-Bromouracil Mutagenesis]] | ||
+ | [[Category:LaRossa citations that need review]] |
Latest revision as of 12:48, 19 April 2013
Citation |
WITKIN, EM and SICURELLA, NA (1964) PURE CLONES OF LACTOSE-NEGATIVE MUTANTS OBTAINED IN ESCHERICHIA COLI AFTER TREATMENT WITH 5-BROMOURACIL. J. Mol. Biol. 8:610-3 |
---|---|
Abstract |
No abstract in PubMed |
Links | |
Keywords |
|
edit table |
Main Points of the Paper
Please summarize the main points of the paper.
- Describes the introduction of mutations (by incorporation of 5BU into DNA) that results in cells unable to ferment lactose
- Sectoring phenotypes appear, indicative of the timing the mutation gets incorporated within a cell of a colony
Materials and Methods Used
Please list the materials and methods used in this paper (strains, plasmids, antibodies, etc).
- Parent strain: Z-15 (radiation-resistant, serine-requiring variant of the thymineless strain B3)
- 5-Bromouracil Mutagenesis (on plates)
- strain plated on 5BU completed 1 round of replication, whereby most of the thymine was replaced by 5BU
- strain plated on thymine (control) completed a normal round of DNA replication
- Bacto-eosin-methylene blue (EMB) indicator agar (for more information, click here)
- dark red colonies (lactose +)
- colorless colonies (lactose -)
- mixed
- large sectors (lac- component originated at the center and constituted one-eighth or more the area of the colony)
- peripheral sectors
Phenotype Annotations
See Help:AnnotationTable for details on how to edit this table.
<protect>
Phenotype of | Taxon Information | Genotype Information (if known) | Condition Information | OMP ID | OMP Term Name | ECO ID | ECO Term Name | Notes | Status |
---|---|---|---|---|---|---|---|---|---|
a mutation or genetic difference within a strain |
|
|
|
OMP:0000284 |
loss of utilization of carbon-containing compound |
ECO:0000178 |
in vivo assay evidence |
Abolished utilization of carbon source lactose in mutant strain. See Table 1. |
|
edit table |
</protect>
Notes
OMP: After carbon utilization terms get finialized, make sure OMP ID matches what is on here since it might change.
ECO: Terms for assays are awaiting implementation of solid and liquid child terms to each one. Experiment used EMB
References
See Help:References for how to manage references in omp dev.