Difference between revisions of "PMID:4887874"

From omp dev
Jump to: navigation, search
(Materials and Methods Used)
(Table edited by Azweifel via TableEdit)
Line 74: Line 74:
 
lacZ  
 
lacZ  
 
|
 
|
able to metabolize melibiose
+
*Growth on melibiose medium
 +
*Melibiose catabolic process
 +
 
 
|
 
|
 
Growth
 
Growth
Line 93: Line 95:
 
lacZ  
 
lacZ  
 
|
 
|
 
+
*Suppressor-dependent growth on lactose medium
 +
*Suppressor-dependent lactose catabolic process
 
|
 
|
 
Growth
 
Growth
Line 112: Line 115:
 
lacZ  
 
lacZ  
 
|
 
|
unable to metabolize melibiose
+
*Abolished melibiose catabolic process
 +
*Absent growth on melibiose medium
 
|
 
|
 
Growth
 
Growth
 
|
 
|
growth on melibiose-polar effects
+
unable to metabolize melibiose/ growth on melibiose-polar effects
 
|
 
|
 
Plating Assay
 
Plating Assay
Line 131: Line 135:
 
lacZ  
 
lacZ  
 
|
 
|
reduced beta-galactosidase activity
+
*Decreased gene expression of beta-galactosidase
 +
*Decreased lactose catabolic process
 
|
 
|
 
Metabolic Activity
 
Metabolic Activity
Line 169: Line 174:
 
lacZ  
 
lacZ  
 
|
 
|
reduced acetylase activity
+
*Decreased acetylase activity
 +
*Decreased lactose catabolic process
 
|
 
|
 
Metabolic Activity
 
Metabolic Activity
Line 184: Line 190:
 
NCBI:562
 
NCBI:562
 
|
 
|
NG545-pi(1)
+
NG545
 
|
 
|
 
lacZ  
 
lacZ  
 
|
 
|
reduced acetylase activity
+
*Suppressor-dependent growth on lactose medium
 +
*Suppressor-dependent lactose catabolic process
 
|
 
|
Metabolic Activity
+
Growth
 
|
 
|
35% of the wild type level when induced
+
able to metabolize lactose only in a su<sub>I</sub><sub>+</sub> background
 
|
 
|
Biochemical Assay
+
Plating Assay
 
|
 
|
Tables 3 and 4  
+
Table 2- UAG polar mutation  
 
|-  
 
|-  
 
|
 
|
Line 203: Line 210:
 
NCBI:562
 
NCBI:562
 
|
 
|
NG545
+
NG545-pi(1)
 
|
 
|
 
lacZ  
 
lacZ  
 
|
 
|
 
+
*Decreased acetylase activity
 +
*Decreased lactose catabolic process
 
|
 
|
Growth
+
Metabolic Activity
 
|
 
|
able to metabolize lactose only in a su<sub>I</sub><sub>+</sub> background
+
35% of the wild type level when induced
 
|
 
|
Plating Assay
+
Biochemical Assay
 
|
 
|
Table 2- UAG polar mutation  
+
Tables 3 and 4  
 
|-  
 
|-  
 
|
 
|
Line 226: Line 234:
 
lacZ  
 
lacZ  
 
|
 
|
reduced acetylase activity
+
*Decreased acetylase activity
 +
*Decreased lactose catabolic process
 
|
 
|
 
Metabolic Activity
 
Metabolic Activity

Revision as of 14:12, 27 January 2011

Citation

Grodzicker, T and Zipser, D (1968) A mutation which creates a new site for the re-initiation of polypeptide synthesis in the z gene of the lac operon of Escherichia coli.J. Mol. Biol. 38:305-14

Abstract

No abstract in PubMed

Links

PubMed

Keywords

Polar Effect; Acyltransferases; Chromosome Mapping; Escherichia coli; Genes; Membrane Transport Proteins; Mutation; Operon; Translation; Suppressor

Main Points of the Paper

  • Polar effects of a UAG mutation in the operator-proximal region of the z gene are studied which leads to the isolation of two suppressor mutations
  • π, a new site of initiation of protein synthesis is described
    • operates efficiently to restore permease and acetylase activity to a high level when induced
    • regulation/induction is still required, so the authors deduce that π is a new site of translation initiation (
    • not a new site of transcriptional initiation because acetylase is not present in the absence of inducer

Materials and Methods Used

  • Parent Strain: NG545 (trp-8, SmS Hfr)
    • UAG mutation had not been altered in the suppressor strains isolated
  • Strain: CA77B (Δlac, trp-8, SmR F-)
  • Strain: X103B (Δlac pro, trp-8, SmR F-)
  • Strain: M107 (Δlac, suI+, SmR F-)
  • Strain: ΔLacW (Δlac, his-, SmR F-)
  • Strain: E29 (lac+ , F'/lac+, threonine-, leucine-, B1-, SmR)
  • Acetylase assay
  • β-galactosidase assay

Phenotype Annotations

See Help:AnnotationTable for details on how to edit this table.
<protect>

Species Taxon ID Strain Gene (if known) OMP Phenotype Details Evidence Notes

Escherichia coli

NCBI:562

NG545-pi(1)a

lacZ

  • Growth on melibiose medium
  • Melibiose catabolic process

Growth

growth on melibiose- polar effects

Plating Assay

Table 2

Escherichia coli

NCBI:562

NG545-pi(1)

lacZ

  • Suppressor-dependent growth on lactose medium
  • Suppressor-dependent lactose catabolic process

Growth

able to metabolize lactose only in a suI+ background

Plating Assay

Table 2- UAG polar mutation

Escherichia coli

NCBI:562

NG545-pi(1)b

lacZ

  • Abolished melibiose catabolic process
  • Absent growth on melibiose medium

Growth

unable to metabolize melibiose/ growth on melibiose-polar effects

Plating Assay

Table 2-

Escherichia coli

NCBI:562

NG545-pi(1)a

lacZ

  • Decreased gene expression of beta-galactosidase
  • Decreased lactose catabolic process

Metabolic Activity

trace amounts when induced

Biochemical Assay

Table 2

Escherichia coli

NCBI:562

NG545-pi(1)b

lacZ

reduced beta-galactosidase activity

Metabolic Activity

trace amounts when induced

Biochemical Assay

Table 2

Escherichia coli

NCBI:562

NG545B

lacZ

  • Decreased acetylase activity
  • Decreased lactose catabolic process

Metabolic Activity

4.2% of the wild type level when induced

Biochemical Assay

Tables 3 and 4

Escherichia coli

NCBI:562

NG545

lacZ

  • Suppressor-dependent growth on lactose medium
  • Suppressor-dependent lactose catabolic process

Growth

able to metabolize lactose only in a suI+ background

Plating Assay

Table 2- UAG polar mutation

Escherichia coli

NCBI:562

NG545-pi(1)

lacZ

  • Decreased acetylase activity
  • Decreased lactose catabolic process

Metabolic Activity

35% of the wild type level when induced

Biochemical Assay

Tables 3 and 4

Escherichia coli

NCBI:562

NG24

lacZ

  • Decreased acetylase activity
  • Decreased lactose catabolic process

Metabolic Activity

4.7% of the wild type level when induced

Biochemical Assay

Table 4

</protect>

Notes

References

See Help:References for how to manage references in omp dev.