|
|
| (7 intermediate revisions by 2 users not shown) |
| Line 1: |
Line 1: |
| − | __TOC__
| + | #redirect [[OMP_ST:796_!_Strain:Bacillus subtilis 168]] |
| − | | |
| − | ==Strain Summary==
| |
| − | <protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.6257.K5589a3c665557-->
| |
| − | <!--
| |
| − | ******************************************************************************************
| |
| − | *
| |
| − | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. **
| |
| − | *
| |
| − | ****************************************************************************************** -->
| |
| − | {| id="K5589a3c665557" class=" tableEdit Strain_info_table"
| |
| − | | |
| − | |-
| |
| − | !align=left align='left' bgcolor='#CCCCFF' |Strain Name
| |
| − | ||
| |
| − | 168
| |
| − | |-
| |
| − | !align=left align='left' bgcolor='#CCCCFF' |Synonyms
| |
| − | ||
| |
| − | subtilis 168
| |
| − | |-
| |
| − | !align=left align='left' bgcolor='#CCCCFF' |Taxon Information
| |
| − | ||
| |
| − | *Pangenome: Bacillus subtilis
| |
| − | *Taxon: 168
| |
| − | *NCBI Taxon ID: 224308
| |
| − | |-
| |
| − | !align=left align='left' bgcolor='#CCCCFF' |Genotype
| |
| − | ||
| |
| − | other:trpC2
| |
| − | |-
| |
| − | !align=left align='left' bgcolor='#CCCCFF' |Strain Reference
| |
| − | ||
| |
| − | PMID:4986704
| |
| − | |-
| |
| − | !align=left align='left' bgcolor='#CCCCFF' |Source
| |
| − | ||
| |
| − | [http://www.bgsc.org/viewdetail.php?bgscid=1A1&Search=168 Bacillus Genetic Stock Center] | |
| − | |-
| |
| − | !align=left align='left' bgcolor='#CCCCFF' |Ancestry
| |
| − | ||
| |
| − | parent:Bacillus subtilis Marburg
| |
| − | |-
| |
| − | !align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
| |
| − | ||
| |
| − | | |
| − | | |
| − | |- class="tableEdit_footer"
| |
| − | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6257.K5589a3c665557&page=6257&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</span> ||
| |
| − | |}
| |
| − | <noinclude>
| |
| − | | |
| − | </noinclude>
| |
| − | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.6257.K5589a3c665557--></protect>
| |
| − | | |
| − | ==Notes==
| |
| − | | |
| − | | |
| − | ==Phenotype Annotation==
| |
| − | <protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.6257.T5589a3c668865-->
| |
| − | <!--
| |
| − | ******************************************************************************************
| |
| − | *
| |
| − | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. **
| |
| − | *
| |
| − | ****************************************************************************************** -->
| |
| − | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="T5589a3c668865" class=" tableEdit OMP_annotation_table dataTable"
| |
| − | |- align='left' bgcolor='#CCCCFF'
| |
| − | !|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes | |
| − | |-
| |
| − | |
| |
| − | OMP_AN:107
| |
| − | |
| |
| − | | |
| − | |
| |
| − | OMP:0000017
| |
| − | |
| |
| − | presence of endospore formation
| |
| − | |
| |
| − | | |
| − | |
| |
| − | temperature:
| |
| − | 37C
| |
| − | medium:
| |
| − | liquid sporulation medium<ref name='PMID:4972255'/>
| |
| − | | |
| − | | |
| − | |
| |
| − | ECO:0001098
| |
| − | |
| |
| − | microscopy evidence
| |
| − | |
| |
| − | PMID:
| |
| − | 4972256
| |
| − | | |
| − | | |
| − | |
| |
| − | | |
| − | |
| |
| − | requires indole or tryptophan for growth
| |
| − | |-
| |
| − | |
| |
| − | OMP_AN:147
| |
| − | |
| |
| − | | |
| − | |
| |
| − | OMP:0000017
| |
| − | |
| |
| − | presence of endospore formation
| |
| − | |
| |
| − | Relative to:
| |
| − | <br>
| |
| − | Genotype differences:<br>
| |
| − | Nothing to compare<br/><br>
| |
| − | Condition differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | |
| |
| − | *temperature:37C
| |
| − | *medium:MnCl2 (0.01 mM)
| |
| − | *medium:minimal glucose medium
| |
| − | |
| |
| − | ECO:0000182
| |
| − | |
| |
| − | in vitro culture assay evidence
| |
| − | |
| |
| − | PMID:4633157
| |
| − | |
| |
| − | | |
| − | |
| |
| − | colony morphology on sporulation medium
| |
| − | |-
| |
| − | |
| |
| − | OMP_AN:241
| |
| − | |
| |
| − | | |
| − | |
| |
| − | OMP:0000017
| |
| − | |
| |
| − | presence of endospore formation
| |
| − | |
| |
| − | Relative to:
| |
| − | <br>
| |
| − | Genotype differences:<br>
| |
| − | Nothing to compare<br/><br>
| |
| − | Condition differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | |
| |
| − | *other:shaking
| |
| − | *temperature:37C
| |
| − | *medium:hydrolyzed casein and inorganic ions
| |
| − | |
| |
| − | ECO:0000182
| |
| − | |
| |
| − | in vitro culture assay evidence
| |
| − | |
| |
| − | PMID:4625072
| |
| − | |
| |
| − | | |
| − | |
| |
| − |
| |
| − | |-
| |
| − | |
| |
| − | OMP_AN:243
| |
| − | |
| |
| − | | |
| − | |
| |
| − | OMP:0000017
| |
| − | |
| |
| − | presence of endospore formation
| |
| − | |
| |
| − | Relative to:
| |
| − | <br>
| |
| − | Genotype differences:<br>
| |
| − | Nothing to compare<br/><br>
| |
| − | Condition differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | |
| |
| − | *temperature:37C
| |
| − | *medium:minimal medium
| |
| − | |
| |
| − | ECO:0000182
| |
| − | |
| |
| − | in vitro culture assay evidence
| |
| − | |
| |
| − | PMID:4197271
| |
| − | |
| |
| − | | |
| − | |
| |
| − | pigmented colony morphology on minimal media
| |
| − | | |
| − | still looking for specific medium components
| |
| − | |-
| |
| − | |
| |
| − | OMP_AN:247
| |
| − | |
| |
| − | | |
| − | |
| |
| − | OMP:0000017
| |
| − | |
| |
| − | presence of endospore formation
| |
| − | |
| |
| − | Relative to:
| |
| − | <br>
| |
| − | Genotype differences:<br>
| |
| − | Nothing to compare<br/><br>
| |
| − | Condition differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | |
| |
| − | *temperature:37C
| |
| − | *medium:hydrolyzed casein
| |
| − | |
| |
| − | ECO:0001098
| |
| − | |
| |
| − | microscopy evidence
| |
| − | |
| |
| − | other:<ref>Jenkinson HF. Germination and resistance defects in spores of a Bacillus subtilis mutant lacking a coat polypeptide. J Gen Microbiol. 1981;127: 81-91</ref>
| |
| − | |
| |
| − | | |
| − | |
| |
| − |
| |
| − | |-
| |
| − | |
| |
| − | OMP_AN:373
| |
| − | |
| |
| − | | |
| − | |
| |
| − | OMP:0000017
| |
| − | |
| |
| − | presence of endospore formation
| |
| − | |
| |
| − | Relative to:
| |
| − | | |
| − | <hr>Genotype differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | <hr>Condition differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | |
| |
| − | *other:100 rpm gyratory shaking
| |
| − | *pH:7
| |
| − | *temperature:37C
| |
| − | *medium:Difco nutrient broth<ref name='PMID:4995746'/>
| |
| − | |
| |
| − | ECO:0001098
| |
| − | |
| |
| − | microscopy evidence
| |
| − | |
| |
| − | PMID:1900505
| |
| − | |
| |
| − | | |
| − | |
| |
| − | FeCL2 omitted from medium
| |
| − | |-
| |
| − | |
| |
| − | OMP_AN:387
| |
| − | |
| |
| − | | |
| − | |
| |
| − | OMP:0000017
| |
| − | |
| |
| − | presence of endospore formation
| |
| − | |
| |
| − | Relative to:
| |
| − | | |
| − | <hr>Genotype differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | <hr>Condition differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | |
| |
| − | *temperature:37C
| |
| − | *medium:nutrient broth sporulation medium
| |
| − | |
| |
| − | ECO:0000182
| |
| − | |
| |
| − | in vitro culture assay evidence
| |
| − | |
| |
| − | PMID:108357
| |
| − | |
| |
| − | | |
| − | |
| |
| − |
| |
| − | |-
| |
| − | |
| |
| − | OMP_AN:389
| |
| − | |
| |
| − | | |
| − | |
| |
| − | OMP:0000017
| |
| − | |
| |
| − | presence of endospore formation
| |
| − | |
| |
| − | Relative to:
| |
| − | | |
| − | <hr>Genotype differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | <hr>Condition differences:<br>
| |
| − | Nothing to compare<br/>
| |
| − | |
| |
| − | *temperature:37C
| |
| − | *medium:[[Sporulation medium of Sterlini and Mandelstam|sporulation medium]]
| |
| − | *medium:glutamate
| |
| − | |
| |
| − | ECO:0000182
| |
| − | |
| |
| − | in vitro culture assay evidence
| |
| − | |
| |
| − | PMID:3934335
| |
| − | |
| |
| − | | |
| − | |
| |
| − |
| |
| − | | |
| − | |- class="tableEdit_footer"
| |
| − | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6257.T5589a3c668865&page=6257&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</span> || || || || || || || || || ||
| |
| − | |}
| |
| − | <noinclude>
| |
| − | <!-- OMP category tags -->
| |
| − | </noinclude>
| |
| − | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.6257.T5589a3c668865--></protect>
| |
| − | | |
| − | | |
| − | ==Additional Information==
| |
| − | | |
| − | | |
| − | ==Links==
| |
| − | | |
| − | | |
| − | ==References==
| |
| − | {{RefHelp}}<references/>
| |
