Difference between revisions of "PMID:7007354"
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==Main Points of the Paper == | ==Main Points of the Paper == | ||
{{LitSignificance}} | {{LitSignificance}} | ||
+ | * 3 amber mutations in ''dnaA'' were isolated and characterized | ||
== Materials and Methods Used == | == Materials and Methods Used == | ||
{{LitMaterials}} | {{LitMaterials}} | ||
+ | * Conditional Integrative Suppression | ||
+ | * This paper includes an extensive strain list | ||
+ | * P1 transduction | ||
+ | * Localized mutagenesis of the ''dnaA'' region (described elsewhere) | ||
+ | *lambda imm<sup>21</sup> Spi<sup>-</sup> ''dnaA'' specialized transducing phage | ||
==Phenotype Annotations== | ==Phenotype Annotations== | ||
Line 51: | Line 57: | ||
|- | |- | ||
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status | !|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status | ||
+ | |- | ||
+ | | | ||
+ | a mutation or genetic difference within a strain | ||
+ | | | ||
+ | *Taxon: Escherichia coli | ||
+ | *Strain: K-12 | ||
+ | *Substrain: NS473 | ||
+ | *NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=83333&lvl=3&lin=f&keep=1&srchmode=1&unlock 83333] | ||
+ | | | ||
+ | *Genotype of Reference Strain: ''dnaA<sup>+</sup>'' | ||
+ | *Genotype of Experimental Strain : ''dnaA311(Am)'' | ||
+ | | | ||
+ | *Reference Condition: 30<sup>o</sup> C | ||
+ | *Experimental Condition: 42<sup>o</sup> C | ||
+ | | | ||
+ | 0000271 | ||
+ | | | ||
+ | temperature-dependent growth | ||
+ | | | ||
+ | 0000178 | ||
+ | | | ||
+ | in vivo assay evidence | ||
+ | | | ||
+ | reduced rate of DNA synthesis in high temperature. See figure 4A for experimental results. | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | a mutation or genetic difference within a strain | ||
+ | | | ||
+ | *Taxon: Escherichia coli | ||
+ | *Strain: K-12 | ||
+ | *Substrain: NS473 | ||
+ | *NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=83333&lvl=3&lin=f&keep=1&srchmode=1&unlock 83333] | ||
+ | | | ||
+ | *Genotype of Reference Strain: ''dnaA<sup>+</sup>'' | ||
+ | *Genotype of Experimental Strain : ''dnaA366(Am)'' | ||
+ | | | ||
+ | *Reference Condition: 30<sup>o</sup> C | ||
+ | *Experimental Condition: 42<sup>o</sup> C | ||
+ | | | ||
+ | 0000271 | ||
+ | | | ||
+ | temperature-dependent growth | ||
+ | | | ||
+ | 0000178 | ||
+ | | | ||
+ | in vivo assay evidence | ||
+ | | | ||
+ | reduced rate of DNA synthesis in high temperature. See figure 4B for experimental results. | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | a mutation or genetic difference within a strain | ||
+ | | | ||
+ | *Taxon: Escherichia coli | ||
+ | *Strain: K-12 | ||
+ | *Substrain: NS473 | ||
+ | *NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=83333&lvl=3&lin=f&keep=1&srchmode=1&unlock 83333] | ||
+ | | | ||
+ | *Genotype of Reference Strain: ''dnaA<sup>+</sup>'' | ||
+ | *Genotype of Experimental Strain : ''dnaA367(Am)'' | ||
+ | | | ||
+ | *Reference Condition: 30<sup>o</sup>C | ||
+ | *Experimental Condition: 42<sup>o</sup>C | ||
+ | | | ||
+ | 0000271 | ||
+ | | | ||
+ | temperature-dependent growth | ||
+ | | | ||
+ | 0000178 | ||
+ | | | ||
+ | in vivo assay evidence | ||
+ | | | ||
+ | reduced rate of DNA synthesis in high temperature. See figure 4C for experimental results. | ||
+ | | | ||
+ | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Line 58: | Line 142: | ||
==Notes== | ==Notes== | ||
+ | * temperature-dependent growth is a place holder for a new terms for Growth | ||
==References== | ==References== | ||
Line 66: | Line 151: | ||
[[Category:Publication]] | [[Category:Publication]] | ||
[[Category:Integrative Suppression]] | [[Category:Integrative Suppression]] | ||
+ | [[Category:LaRossa citations that need review]] |
Latest revision as of 18:38, 22 May 2013
Citation |
Schaus, N, O'Day, K, Peters, W and Wright, A (1981) Isolation and characterization of amber mutations in gene dnaA of escherichia coli K-12. J. Bacteriol. 145:904-13 |
---|---|
Abstract |
Amber mutants with defects in the dnaA gene of Escherichia coli K-12 were isolated after localized mutagenesis of the tna-dnaA region of the chromosome. We isolated 36 mutants defective in the initiation of deoxyribonucleic acid replication as determined by their dependence upon integrative suppression by a P2 sig5 prophage. Three of the 36 mutants were shown to contain amber mutations through the use of a temperature-sensitive amber suppressor. These mutations, which mapped between gyrB and tna, were characterized genetically and biochemically as amber mutations in dnaA. |
Links | |
Keywords |
Bacterial Proteins/biosynthesis; Bacterial Proteins/genetics; Chromosome Mapping; DNA Replication; DNA, Bacterial/genetics; Escherichia coli/genetics; Genes; Genetic Complementation Test; Mutation; Transduction, Genetic |
edit table |
Main Points of the Paper
Please summarize the main points of the paper.
- 3 amber mutations in dnaA were isolated and characterized
Materials and Methods Used
Please list the materials and methods used in this paper (strains, plasmids, antibodies, etc).
- Conditional Integrative Suppression
- This paper includes an extensive strain list
- P1 transduction
- Localized mutagenesis of the dnaA region (described elsewhere)
- lambda imm21 Spi- dnaA specialized transducing phage
Phenotype Annotations
See Help:AnnotationTable for details on how to edit this table.
<protect>
Phenotype of | Taxon Information | Genotype Information (if known) | Condition Information | OMP ID | OMP Term Name | ECO ID | ECO Term Name | Notes | Status |
---|---|---|---|---|---|---|---|---|---|
a mutation or genetic difference within a strain |
|
|
|
0000271 |
temperature-dependent growth |
0000178 |
in vivo assay evidence |
reduced rate of DNA synthesis in high temperature. See figure 4A for experimental results. |
|
a mutation or genetic difference within a strain |
|
|
|
0000271 |
temperature-dependent growth |
0000178 |
in vivo assay evidence |
reduced rate of DNA synthesis in high temperature. See figure 4B for experimental results. |
|
a mutation or genetic difference within a strain |
|
|
|
0000271 |
temperature-dependent growth |
0000178 |
in vivo assay evidence |
reduced rate of DNA synthesis in high temperature. See figure 4C for experimental results. |
|
edit table |
</protect>
Notes
- temperature-dependent growth is a place holder for a new terms for Growth
References
See Help:References for how to manage references in omp dev.