Difference between revisions of "New OBOEdit File Notes"

From omp dev
Jump to: navigation, search
(Created page with '==To open a new project== *Open OBOEdit program *Select File: New Ontology This will open a new empty OBOEdit file ==To adjust the settings for the project== *Metadata tab: id …')
 
(To adjust the settings for the project)
 
Line 11: Line 11:
  
 
*Metadata tab: namespace manager
 
*Metadata tab: namespace manager
**make sure microbial_observable_ontology.obo
+
**make sure MOO.obo
  
 
This name is redundant and should be shortened to microbial_observable.obo since the obo means that it's an ontology file.
 
This name is redundant and should be shortened to microbial_observable.obo since the obo means that it's an ontology file.

Latest revision as of 14:49, 21 February 2011

To open a new project

  • Open OBOEdit program
  • Select File: New Ontology

This will open a new empty OBOEdit file

To adjust the settings for the project

  • Metadata tab: id manager
    • new id setting

(+) profile name

  • Metadata tab: namespace manager
    • make sure MOO.obo

This name is redundant and should be shortened to microbial_observable.obo since the obo means that it's an ontology file.

Terms

  • (7, 1, 9999999) this is to indicate the numbers will be 7-digits long, starting at 1 and going through 9,999,999
  • Commit
  • If you put in a definition, then you have to put in a DBXref
    • (+)
    • database:MOO

ID: initials (AEZ) Default rule: MOO:$sequence (7,1,9999999)$